Daniel S Ziemianowicz - European Molecular Biology Laboratory

基本信息

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职业迁徙

个人简介

Daniel is currently a postdoctoral fellow (EIPOD) in the Kosinski lab at EMBL Hamburg. Daniel does research in integrative structural and systems biology with a focus on mass spectrometry, cryo-electron tomography and computational modelling.

研究兴趣

论文共 16 篇作者统计合作学者相似作者

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New Opportunities in Integrative Structural Modeling

Daniel S. Ziemianowicz,Jan Kosinski

Current Opinion in Structural Biology (2022): 102488

引用7浏览0WOS引用

Structure of the Mycobacterial ESX-5 Type VII Secretion System Hexameric Pore Complex

Katherine S. H. Beckham,Christina Ritter,Grzegorz Chojnowski,Daniel S. Ziemianowicz,Edukondalu Mullapudi,Mandy Rettel,Mikhail M. Savitski,Simon A. Mortensen,Jan Kosinski,Matthias Wilmanns

Science Advances（2021）

引用38浏览0WOSSCIENCE引用

IMProv: A Resource for Cross-link-Driven Structure Modeling That Accommodates Protein Dynamics

Daniel S. Ziemianowicz,Daniel Saltzberg,Troy Pells,D. Alex Crowder,Christoph Schrader,Morgan Hepburn,Andrej Sali,David C. Schriemer

Molecular & Cellular Proteomics（2021）

引用7浏览0WOS引用

Correlation Between Labeling Yield and Surface Accessibility in Covalent Labeling Mass Spectrometry

Daniel S. Ziemianowicz,Justin L. MacCallum,David C. Schriemer

Journal of the American Society for Mass Spectrometry（2020）

引用9浏览0WOS引用

The Substrate Specificity of the Human TRAPPII Complex’s Rab-guanine Nucleotide Exchange Factor Activity

Meredith L. Jenkins,Noah J. Harris,Udit Dalwadi,Kaelin D. Fleming,Daniel S. Ziemianowicz,Atefeh Rafiei, Emily M. Martin,David C. Schriemer,Calvin K. Yip,John E. Burke

Communications Biology（2020）

引用14浏览0WOSNATURE引用

Harmonizing Structural Mass Spectrometry Analyses in the Mass Spec Studio

Daniel S. Ziemianowicz,Vladimir Sarpe,D. Alex Crowder,Troy J. Pells,Shaunak Raval,Morgan Hepburn,Atefeh Rafiei,David C. Schriemer

JOURNAL OF PROTEOMICS（2020）

引用7浏览0WOS引用

First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study

Claudio Iacobucci,Christine Piotrowski,Ruedi Aebersold,Bruno C. Amaral,Philip Andrews,Katja Bernfur,Christoph Borchers, Nicolas I. Brodie,James E. Bruce,Yong Cao,Stephane Chaignepain,Juan D. Chavez,Stephane Claverol,Juergen Cox,Trisha Davis,Gianluca Degliesposti,Meng-Qiu Dong,Nufar Edinger,Cecilia Emanuelsson,Marina Gay,Michael Goetze,Francisco Gomes-Neto,Fabio C. Gozzo,Craig Gutierrez,Caroline Haupt,Albert J. R. Heck,Franz Herzog,Lan Huang,Michael R. Hoopmann,Nir Kalisman,Oleg Klykov,Zdenek Kukacka,Fan Liu,Michael J. MacCoss,Karl Mechtler,Ravit Mesika,Robert L. Moritz,Nagarjuna Nagaraj,Victor Nesati,Ana G. C. Neves-Ferreira,Robert Ninnis,Petr Novak,Francis J. O'Reilly,Matthias Pelzing,Evgeniy Petrotchenko,Lolita Piersimoni,Manolo Plasencia,Tara Pukala,Kasper D. Rand,Juri Rappsilber,Dana Reichmann,Carolin Sailer,Chris P. Sarnowski,Richard A. Scheltema,Carla Schmidt,David C. Schriemer, Yi Shi,J. Mark Skehel,Moriya Slavin,Frank Sobott,Victor Solis-Mezarino,Heike Stephanowitz,Florian Stengel,Christian E. Stieger,Esben Trabjerg,Michael Trnka,Marta Vilaseca,Rosa Viner,Yufei Xiang,Sule Yilmaz,Alex Zelter,Daniel Ziemianowicz,Alexander Leitner,Andrea Sinz

Analytical Chemistry（2019）

引用103浏览0WOS引用

103

Quantitative Analysis of Protein Covalent Labeling Mass Spectrometry Data in the Mass Spec Studio

Daniel S. Ziemianowicz,Vladimir Sarpe,David C. Schriemer

Analytical Chemistry（2019）

引用15浏览0WOS引用

Photo-Cross-Linking Mass Spectrometry and Integrative Modeling Enables Rapid Screening of Antigen Interactions Involving Bacterial Transferrin Receptors

Daniel S. Ziemianowicz,Dixon Ng,Anthony B. Schryvers,David C. Schriemer

Journal of Proteome Research（2018）

引用25浏览0WOS引用

Cross-linking/Mass Spectrometry: A Community-Wide, Comparative Study Towards Establishing Best Practice Guidelines

Claudio Iacobucci,Christine Piotrowski,Ruedi Aebersold,Bruno C. Amaral,Philip Andrews,Christoph Borchers, Nicolas I. Brodie,James E. Bruce,Stéphane Chaignepain,Juan D. Chavez,Stéphane Claverol,Jürgen Cox,Gianluca Degliesposti,Meng-Qiu Dong,Nufar Edinger,Cecilia Emanuelsson,Marina Gay,Michael Götze,Fabio C. Gozzo,Craig Gutierrez,Caroline Haupt,Albert J. R. Heck,Franz Herzog,Lan Huang,Michael R. Hoopmann,Nir Kalisman,Oleg Klykov,Zdeněk Kukačka,Fan Liu,Michael J. MacCoss,Karl Mechtler,Ravit Mesika,Robert L. Moritz,Nagarjuna Nagaraj,Victor Nesati,Robert Ninnis,Petr Novák,Francis J O’Reilly,Matthias Pelzing,Evgeniy Petrotchenko,Lolita Piersimoni,Manolo Plasencia,Tara Pukala,Kasper D. Rand,Juri Rappsilber,Dana Reichmann, Caroline Sailer,Chris P. Sarnowski,Richard A. Scheltema,Carla Schmidt,David C. Schriemer, Yi Shi,J. Mark Skehel,Moriya Slavin,Frank Sobott,Victor Solis-Mezarino,Heike Stephanowitz,Florian Stengel,Christian E. Stieger,Michael Trnka,Marta Vilaseca,Rosa Viner,Yufei Xiang,Sule Yilmaz,Alex Zelter,Daniel Ziemianowicz,Alexander Leitner,Andrea Sinz

bioRxiv（2018）

引用4浏览0引用

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