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Visualizing Variation Within Global Pneumococcal Sequence Clusters (gpscs) and Country Population Snapshots to Contextualize Pneumococcal Isolates

Rebecca A. Gladstone,Stephanie W. Lo,Richard Goater,Corin Yeats,Ben Taylor,James Hadfield,John A. Lees,Nicholas J. Croucher,Andries J. van Tonder, Leon J. Bentley, Fu Xiang Quah,Anne J. Blaschke,Nicole L. Pershing,Carrie L. Byington,Veeraraghavan Balaji,Waleria Hryniewicz,Betuel Sigauque,K. L. Ravikumar,Samanta Cristine Grassi Almeida,Theresa J. Ochoa,Pak Leung Ho,Mignon du Plessis,Kedibone M. Ndlangisa,Jennifer E. Cornick,Brenda Kwambana-Adams,Rachel Benisty,Susan A. Nzenze,Shabir A. Madhi,Paulina A. Hawkins,Andrew J. Pollard,Dean B. Everett,Martin Antonio,Ron Dagan,Keith P. Klugman,Anne von Gottberg,Benjamin J. Metcalf,Yuan Li,Bernard W. Beall,Lesley McGee,Robert F. Breiman,David M. Aanensen,Stephen D. Bentley

MICROBIAL GENOMICS（2020）

Cited 33|Views54
Key words
Streptococcus pneumoniae,pneumococcal,whole genome sequencing,population structure,recombination,antibiotic resistance,pangenome,phylogenetic dating
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