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Development and Validation of a Machine Learning-Based Model for Varices Screening in Compensated Cirrhosis (CHESS2001): an International Multicenter Study

GASTROINTESTINAL ENDOSCOPY(2023)

Southeast Univ | Tianjin Second Peoples Hosp | Affiliated Hosp Xuzhou Med Univ | Chinese Peoples Liberat Army Gen Hosp | Changi Gen Hosp | Capital Med Univ | Sixth Peoples Hosp Shenyang | Baoding Peoples Hosp | Inst Liver & Biliary Sci ILBS | Qingdao Univ | Ankang Cent Hosp | Guangzhou Univ Chinese Med | Fudan Univ | Xian Med Univ | Mengzi Peoples Hosp | Dalian Publ Hlth Clin Ctr | Hubei Univ Med | Nanjing Hosp Chinese Med | Gen Hosp Western Theater Command PLA | Xingtai Peoples Hosp | Univ Pittsburgh | Lanzhou Univ

Cited 5|Views52
Abstract
Background and Aims: The prevalence of high-risk varices (HRV) is low among compensated cirrhotic patients undergoing EGD. Our study aimed to identify a novel machine learning (ML)-based model, named ML EGD, for ruling out HRV and avoiding unnecessary EGDs in patients with compensated cirrhosis. Methods: An international cohort from 17 institutions from China, Singapore, and India were enrolled (CHESS2001). The variables with the top 3 importance scores (liver stiffness, platelet count, and total bilirubin) were selected by the Shapley additive explanation and input into a light gradient-boosting machine algorithm to develop ML EGD for identification of HRV. Furthermore, we built a web-based calculator for ML EGD, which is free with open access (http://www.pan-chess.cn/calculator/MLEGD_score). Unnecessary EGDs that were not performed and the rates of missed HRV were used to assess the efficacy and safety for varices screening. Results: Of 2794 enrolled patients, 1283 patients formed a real-world cohort from 1 university hospital in China used to develop and internally validate the performance of ML EGD for varices screening. They were randomly assigned into the training (n Z 1154) and validation (n Z 129) cohorts with a ratio of 9:1. In the training cohort, ML EGD spared 607 (52.6%) unnecessary EGDs with a missed HRV rate of 3.6%. In the validation cohort, ML EGD spared 75 (58.1%) EGDs with a missed HRV rate of 1.4%. To externally test the performance of ML EGD, 966 patients from 14 university hospitals in China (test cohort 1) and 545 from 2 hospitals in Singapore and India (test cohort 2) comprised the 2 test cohorts. In test cohort 1, ML EGD spared 506 (52.4%) EGDs with a missed HRV rate of 2.8%. In test cohort 2, ML EGD spared 224 (41.1%) EGDs with a missed HRV rate of 3.1%. When compared with the Baveno VI criteria, ML EGD spared more screening EGDs in all cohorts (training cohort, 52.6% vs 29.4%; validation cohort, 58.1% vs 44.2%; test cohort 1, 52.4% vs 26.5%; test cohort 2, 41.1% vs 21.1%, respectively; P <.001). Conclusions: We identified a novel model based on liver stiffness, platelet count, and total bilirubin, named ML EGD, as a free web-based calculator. ML EGD could efficiently help rule out HRV and avoid unnecessary EGDs in patients with compensated cirrhosis. (Clinical trial registration number: NCT04307264.) [GRAPHICS] .
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AUC,GBDT,GEV,HRV,INR,IQR,LightGBM,LSM,ML,NPV,PLT,ROC,TBIL,TE
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要点】:本研究开发并验证了一种基于机器学习的新型模型ML EGD,用于在代偿期肝硬化患者中筛查高风险静脉曲张,以减少不必要的胃镜检查。

方法】:通过Shapley additive explanation方法筛选出三个最重要的变量(肝脏硬度、血小板计数和总胆红素),并使用light gradient-boosting machine算法构建ML EGD模型。

实验】:研究纳入2794名患者,其中1283名来自中国一所大学医院的患者用于开发和内部验证ML EGD模型的性能,分为训练集(1154名)和验证集(129名)。外部测试使用了来自中国14所大学医院的966名患者(测试集1)和来自新加坡和印度两所医院的545名患者(测试集2)。结果显示,ML EGD在训练集、验证集和两个测试集中均能有效减少不必要的胃镜检查,并保持较低的漏诊高风险静脉曲张率。数据集名称未明确提及。