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SlideCNA: Spatial Copy Number Alteration Detection from Slide-seq-like Spatial Transcriptomics Data

Diane Zhang,Åsa Segerstolpe,Michal Slyper,Julia Waldman,Evan Murray, Robert Strasser, Jan Watter,Ofir Cohen,Orr Ashenberg,Daniel Abravanel,Judit Jané-Valbuena,Simon Mages,Ana Lako,Karla Helvie,Orit Rozenblatt-Rosen,Scott Rodig,Fei Chen,Nikhil Wagle,Aviv Regev,Johanna Klughammer

Genome Biology（2025）

Cited 0|Views44
Key words
Spatial transcriptomics,Slide-seq,Single-cell RNA-seq,Copy number alterations,Cancer,Tumor microenvironment,Clonality
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